Information for motif38


Reverse Opposite:

p-value:1e-7
log p-value:-1.669e+01
Information Content per bp:1.765
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif51.0
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets438.1 +/- 345.9bp
Average Position of motif in Background481.2 +/- 373.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GSGCGYTG----
NNNTNGGGCGTATNNTN

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GSGCGYTG----
NTCGCGCGCCTTNNN

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GSGCGYTG-
-GGCGCGCT

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GSGCGYTG-
--GTGTTGN

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GSGCGYTG--
NNNAAGGGGGCGGGNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GSGCGYTG----
ANCGCGCGCCCTTNN

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GSGCGYTG----
NNAGGGGCGGGGTNNA

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GSGCGYTG
---NGCTN

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GSGCGYTG--
NCANGCGCGCGCGCCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GSGCGYTG
-TGCGTG-