Information for motif40


Reverse Opposite:

p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets323.0 +/- 201.6bp
Average Position of motif in Background253.4 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0474.1_Erg/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACATGAAGAG-
ACAGGAAGTGG

MA0098.2_Ets1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACATGAAGAG--
NNNACAGGAAGTGGN

MA0475.1_FLI1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGAAGAG-
ACAGGAAGTGG

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGAAGAG
ACAGGAAGTG

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACATGAAGAG
ACAGGAAGTG

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACATGAAGAG
AACAGGAAGT-

MA0473.1_ELF1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACATGAAGAG
GAACCAGGAAGTG

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ACATGAAGAG-
NNTATTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ACATGAAGAG-
ANTATTACATGTANNNN

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ACATGAAGAG--
AATATACATGTAAAATT