Information for motif43


Reverse Opposite:

p-value:1e-6
log p-value:-1.498e+01
Information Content per bp:1.605
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets264.8 +/- 157.9bp
Average Position of motif in Background360.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.88
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAACGGGAC
TGGAAAA------

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGAAAACGGGAC--
GCAAAACATTACTA

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGAAAACGGGAC----
NANTGGAAAAANTGAGTCAN

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GGAAAACGGGAC
NNNNGGGGGAAGANGG---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAACGGGAC
AATGGAAAAT-----

MA0480.1_Foxo1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAAAACGGGAC
TGTAAACAGGA-

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGAAAACGGGAC---
GGAAANTGAAACTNA

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAACGGGAC--
NNTNNACAATGGGANNN

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAAAACGGGAC--
GGAGAAAGGTGCGA

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAAAACGGGAC
AGAGGAA--------