Information for motif49


Reverse Opposite:

p-value:1e-5
log p-value:-1.197e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets281.4 +/- 226.1bp
Average Position of motif in Background258.4 +/- 259.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ACCGTAGT----
ATTTACAGTAGCAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ACCGTAGT----
ATGTACAGTAGCAAAG

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACCGTAGT---
ATGGAAACCGTTATTTT

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACCGTAGT---
TTGAAAACCGTTAATTT

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACCGTAGT-
-CCTTTGTT

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACCGTAGT
GGTAAGTA--

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACCGTAGT-----
TNNTTTCGTATTNNANN

MA0027.1_En1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACCGTAGT----
-AAGTAGTGCCC

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACCGTAGT------
TACCCTAGTTACCGA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ACCGTAGT
NAAACCACAG-