Information for motif50


Reverse Opposite:

p-value:1e-4
log p-value:-1.119e+01
Information Content per bp:1.935
Number of Target Sequences with motif225.0
Percentage of Target Sequences with motif9.00%
Number of Background Sequences with motif273.1
Percentage of Background Sequences with motif6.78%
Average Position of motif in Targets441.7 +/- 341.6bp
Average Position of motif in Background469.2 +/- 394.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCGCAATA----
NNTNNCAATATTAG

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCGCAATA----
CAATTGCAAAAATAT

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGCAATA--
TTGCAACATN

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCGCAATA
ATTCTCGCGAGA

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCGCAATA
TTATGCAAT-

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCGCAATA
GTTGCGCAAT-

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCGCAATA--
GGNTCTCGCGAGAAC

MA0527.1_ZBTB33/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCGCAATA----
CTCTCGCGAGATCTG

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCGCAATA--
AGATGCAATCCC

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCGCAATA----
--GTCATAAAAN