Information for motif52


Reverse Opposite:

p-value:1e-3
log p-value:-7.724e+00
Information Content per bp:1.903
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif62.1
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets373.7 +/- 390.6bp
Average Position of motif in Background435.7 +/- 407.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TCCGGGMG
NRYTTCCGGY--

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCCGGGMG
CTTCCNGGAA

MA0028.1_ELK1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCCGGGMG
CTTCCGGNNN

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCCGGGMG----
NNNACCGAGAGTNNN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCCGGGMG
HACTTCCGGY--

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCGGGMG-
TNNGGGCAG

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCCGGGMG
ACATCCTGNT-

MA0062.2_GABPA/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCGGGMG----
-CCGGAAGTGGC

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TCCGGGMG
NRYTTCCGGH--

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCCGGGMG
ACTTCCGGNT-