Information for motif53


Reverse Opposite:

p-value:1e-2
log p-value:-5.402e+00
Information Content per bp:1.715
Number of Target Sequences with motif147.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif190.5
Percentage of Background Sequences with motif4.73%
Average Position of motif in Targets459.0 +/- 366.1bp
Average Position of motif in Background406.6 +/- 364.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.90
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TATATATATATA--
TGTATATATATACC

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TATATATATATA
TCTTTATATATAAATA

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TATATATATATA-
ATGGGATATATCCGCCT

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TATATATATATA
----TATGTNTA

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TATATATATATA-----
AAAATATGCATAATAAA

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TATATATATATA
ANTNTTACATGTATNTA

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TATATATATATA------
---GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TATATATATATA------
---GTATAAAAGGCGGGG

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TATATATATATA
ANTTNTACATGTANTTN

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TATATATATATA
NNTATTACATGTANNNT