Information for motif7


Reverse Opposite:

p-value:1e-14
log p-value:-3.416e+01
Information Content per bp:1.887
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets373.2 +/- 320.0bp
Average Position of motif in Background560.6 +/- 196.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------GAGAGTTRMG
TTGACCGAGAATTCC-

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGTTRMG
GNNACCGAGAATNNN-

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGTTRMG
NNNACCGAGAGTNNN-

MA0100.2_Myb/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGTTRMG
TGGCAGTTGN-

MA0038.1_Gfi1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGTTRMG
CNGTGATTTN--

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGAGTTRMG
TGGCAGTTGG-

MA0075.1_Prrx2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGAGTTRMG
---AATTA--

MA0035.3_Gata1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGAGTTRMG--
-ANAGATAAGAA

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGAGTTRMG-
NNGAGATAAGA

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GAGAGTTRMG--
NNNTGGCAGTTGGTNN