Information for motif9


Reverse Opposite:

p-value:1e-14
log p-value:-3.248e+01
Information Content per bp:1.464
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets344.4 +/- 167.6bp
Average Position of motif in Background488.4 +/- 217.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0102.3_CEBPA/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGGTTGAGCAG-
--NATTGTGCAAT

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGGTTGAGCAG--
AGGGGGATTAGCTGCC

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGGTTGAGCAG
GGGGNGGGGC--

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGGGTTGAGCAG-
---GTTGCGCAAT

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTTGAGCAG
GGGGGCGGGGC--

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGGGTTGAGCAG
AGGGGGCGGGGCTG

MA0111.1_Spz1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTGAGCAG
AGGGTAACAGC--

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGGTTGAGCAG
-GTGTTGN----

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGGGTTGAGCAG--
----GGGAGGACNG

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGGTTGAGCAG----
NNNNTTGGGCACNNCN