Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 2500)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 4028)	% of Background Sequences with Motif
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e-1	-4.403e+00	1.0000	132.0	5.28%	174.4	4.33%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e-1	-4.367e+00	1.0000	82.0	3.28%	102.8	2.55%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-3.886e+00	1.0000	752.0	30.09%	1136.2	28.22%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e-1	-3.198e+00	1.0000	6.0	0.24%	4.8	0.12%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-1	-2.947e+00	1.0000	87.0	3.48%	117.2	2.91%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-1	-2.911e+00	1.0000	458.0	18.33%	688.6	17.10%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e-1	-2.619e+00	1.0000	178.0	7.12%	257.1	6.39%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-2.603e+00	1.0000	130.0	5.20%	184.5	4.58%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-2.490e+00	1.0000	168.0	6.72%	243.3	6.04%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e-1	-2.437e+00	1.0000	55.0	2.20%	73.6	1.83%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-2.406e+00	1.0000	157.0	6.28%	227.7	5.66%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e-1	-2.358e+00	1.0000	141.0	5.64%	203.8	5.06%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-2.314e+00	1.0000	172.0	6.88%	251.1	6.24%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.224e+00	1.0000	46.0	1.84%	61.5	1.53%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-2.175e+00	1.0000	587.0	23.49%	904.3	22.46%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-2.150e+00	1.0000	323.0	12.93%	488.6	12.14%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.590e+00	1.0000	552.0	22.09%	861.7	21.40%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.583e+00	1.0000	44.0	1.76%	62.6	1.56%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.576e+00	1.0000	30.0	1.20%	41.5	1.03%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-1.480e+00	1.0000	54.0	2.16%	78.8	1.96%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-1.478e+00	1.0000	12.0	0.48%	15.2	0.38%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.470e+00	1.0000	483.0	19.33%	754.7	18.75%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.461e+00	1.0000	130.0	5.20%	196.5	4.88%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.442e+00	1.0000	59.0	2.36%	86.3	2.14%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.438e+00	1.0000	184.0	7.36%	281.1	6.98%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.435e+00	1.0000	140.0	5.60%	212.2	5.27%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.428e+00	1.0000	131.0	5.24%	198.3	4.93%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.388e+00	1.0000	2196.0	87.88%	3518.4	87.39%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.278e+00	1.0000	438.0	17.53%	688.0	17.09%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.267e+00	1.0000	99.0	3.96%	150.6	3.74%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.253e+00	1.0000	111.0	4.44%	169.8	4.22%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.231e+00	1.0000	565.0	22.61%	891.2	22.14%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.224e+00	1.0000	277.0	11.08%	432.4	10.74%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.208e+00	1.0000	46.0	1.84%	69.0	1.71%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-1.178e+00	1.0000	29.0	1.16%	42.8	1.06%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.165e+00	1.0000	171.0	6.84%	265.5	6.60%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.135e+00	1.0000	685.0	27.41%	1086.5	26.99%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.129e+00	1.0000	314.0	12.57%	493.1	12.25%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.127e+00	1.0000	139.0	5.56%	215.5	5.35%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.105e+00	1.0000	9.0	0.36%	12.1	0.30%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.101e+00	1.0000	62.0	2.48%	94.7	2.35%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.078e+00	1.0000	589.0	23.57%	934.1	23.20%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.059e+00	1.0000	227.0	9.08%	356.6	8.86%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-1.017e+00	1.0000	34.0	1.36%	51.6	1.28%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.014e+00	1.0000	794.0	31.77%	1265.2	31.43%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-9.539e-01	1.0000	295.0	11.80%	467.3	11.61%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-9.393e-01	1.0000	184.0	7.36%	290.8	7.22%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-9.179e-01	1.0000	567.0	22.69%	904.1	22.46%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-9.077e-01	1.0000	238.0	9.52%	377.7	9.38%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-8.688e-01	1.0000	668.0	26.73%	1068.9	26.55%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-8.460e-01	1.0000	1220.0	48.82%	1957.2	48.61%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-8.340e-01	1.0000	776.0	31.05%	1243.5	30.89%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-8.210e-01	1.0000	241.0	9.64%	384.3	9.55%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-8.179e-01	1.0000	269.0	10.76%	429.4	10.67%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-8.073e-01	1.0000	126.0	5.04%	200.0	4.97%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-7.741e-01	1.0000	196.0	7.84%	313.9	7.80%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-7.642e-01	1.0000	694.0	27.77%	1114.1	27.67%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-7.589e-01	1.0000	8.0	0.32%	12.4	0.31%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-7.581e-01	1.0000	309.0	12.36%	495.8	12.31%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-7.420e-01	1.0000	804.0	32.17%	1292.3	32.10%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-7.268e-01	1.0000	26.0	1.04%	41.1	1.02%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-7.099e-01	1.0000	295.0	11.80%	475.0	11.80%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-6.494e-01	1.0000	49.0	1.96%	79.1	1.96%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-6.475e-01	1.0000	36.0	1.44%	58.3	1.45%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-6.463e-01	1.0000	166.0	6.64%	268.6	6.67%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-6.323e-01	1.0000	874.0	34.97%	1410.9	35.04%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-6.315e-01	1.0000	578.0	23.13%	933.0	23.18%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-6.226e-01	1.0000	744.0	29.77%	1201.8	29.85%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-6.138e-01	1.0000	103.0	4.12%	167.4	4.16%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-5.907e-01	1.0000	70.0	2.80%	114.5	2.84%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-5.881e-01	1.0000	30.0	1.20%	49.6	1.23%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-5.546e-01	1.0000	546.0	21.85%	885.5	22.00%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-5.240e-01	1.0000	404.0	16.17%	657.9	16.34%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-5.016e-01	1.0000	1448.0	57.94%	2342.1	58.18%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-4.988e-01	1.0000	53.0	2.12%	88.3	2.19%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-4.786e-01	1.0000	357.0	14.29%	583.4	14.49%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-4.626e-01	1.0000	459.0	18.37%	749.3	18.61%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-4.473e-01	1.0000	1188.0	47.54%	1927.0	47.87%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-4.441e-01	1.0000	196.0	7.84%	323.3	8.03%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-4.340e-01	1.0000	717.0	28.69%	1168.6	29.03%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.318e-01	1.0000	1638.0	65.55%	2652.9	65.89%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-4.173e-01	1.0000	1196.0	47.86%	1943.0	48.26%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-4.154e-01	1.0000	529.0	21.17%	865.7	21.50%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-4.005e-01	1.0000	53.0	2.12%	90.9	2.26%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-3.992e-01	1.0000	56.0	2.24%	95.8	2.38%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-3.984e-01	1.0000	697.0	27.89%	1138.4	28.28%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-3.901e-01	1.0000	108.0	4.32%	181.8	4.52%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-3.886e-01	1.0000	202.0	8.08%	335.5	8.33%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-3.846e-01	1.0000	197.0	7.88%	327.8	8.14%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-3.777e-01	1.0000	206.0	8.24%	342.5	8.51%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-3.724e-01	1.0000	573.0	22.93%	939.8	23.34%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-3.658e-01	1.0000	73.0	2.92%	124.6	3.09%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-3.628e-01	1.0000	102.0	4.08%	172.4	4.28%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-3.585e-01	1.0000	1071.0	42.86%	1746.0	43.37%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-3.383e-01	1.0000	745.0	29.81%	1220.2	30.31%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-3.067e-01	1.0000	96.0	3.84%	164.7	4.09%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-3.053e-01	1.0000	404.0	16.17%	670.0	16.64%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.963e-01	1.0000	22.0	0.88%	40.7	1.01%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-2.829e-01	1.0000	30.0	1.20%	54.7	1.36%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-2.817e-01	1.0000	1034.0	41.38%	1692.8	42.05%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-2.795e-01	1.0000	75.0	3.00%	130.9	3.25%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-2.771e-01	1.0000	314.0	12.57%	524.6	13.03%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-2.738e-01	1.0000	1505.0	60.22%	2451.5	60.89%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-2.722e-01	1.0000	20.0	0.80%	37.6	0.93%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-2.638e-01	1.0000	984.0	39.38%	1613.6	40.08%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.588e-01	1.0000	262.0	10.48%	440.2	10.93%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.549e-01	1.0000	114.0	4.56%	196.3	4.88%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.502e-01	1.0000	434.0	17.37%	722.3	17.94%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.493e-01	1.0000	407.0	16.29%	678.7	16.86%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-2.404e-01	1.0000	310.0	12.40%	520.1	12.92%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-2.396e-01	1.0000	192.0	7.68%	326.1	8.10%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-2.284e-01	1.0000	439.0	17.57%	732.9	18.20%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.279e-01	1.0000	1247.0	49.90%	2041.3	50.70%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.274e-01	1.0000	1668.0	66.75%	2717.5	67.50%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-2.269e-01	1.0000	668.0	26.73%	1105.8	27.47%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.264e-01	1.0000	75.0	3.00%	132.2	3.28%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-2.218e-01	1.0000	557.0	22.29%	926.0	23.00%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-2.206e-01	1.0000	691.0	27.65%	1143.5	28.40%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-2.165e-01	1.0000	856.0	34.25%	1411.7	35.06%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-2.144e-01	1.0000	930.0	37.21%	1531.6	38.04%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.125e-01	1.0000	1040.0	41.62%	1709.8	42.47%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.067e-01	1.0000	553.0	22.13%	920.9	22.87%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-2.051e-01	1.0000	575.0	23.01%	956.2	23.75%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-2.042e-01	1.0000	1267.0	50.70%	2076.3	51.57%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-2.020e-01	1.0000	45.0	1.80%	82.4	2.05%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-2.016e-01	1.0000	88.0	3.52%	155.0	3.85%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.964e-01	1.0000	126.0	5.04%	219.8	5.46%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-1.964e-01	1.0000	31.0	1.24%	58.0	1.44%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.669e-01	1.0000	302.0	12.08%	513.8	12.76%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.627e-01	1.0000	154.0	6.16%	268.9	6.68%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.585e-01	1.0000	389.0	15.57%	657.7	16.34%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.582e-01	1.0000	28.0	1.12%	54.6	1.36%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-1.581e-01	1.0000	55.0	2.20%	101.3	2.52%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.542e-01	1.0000	1264.0	50.58%	2078.8	51.63%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.512e-01	1.0000	1461.0	58.46%	2395.3	59.50%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.477e-01	1.0000	898.0	35.93%	1488.5	36.97%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.422e-01	1.0000	1803.0	72.15%	2943.8	73.12%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.370e-01	1.0000	584.0	23.37%	979.7	24.33%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.351e-01	1.0000	170.0	6.80%	297.9	7.40%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.324e-01	1.0000	1413.0	56.54%	2321.7	57.67%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-1.322e-01	1.0000	476.0	19.05%	803.3	19.95%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.291e-01	1.0000	190.0	7.60%	331.5	8.23%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.262e-01	1.0000	19.0	0.76%	39.8	0.99%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.258e-01	1.0000	740.0	29.61%	1235.3	30.68%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.240e-01	1.0000	301.0	12.04%	516.4	12.83%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-1.216e-01	1.0000	774.0	30.97%	1291.8	32.09%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.164e-01	1.0000	160.0	6.40%	283.0	7.03%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.126e-01	1.0000	186.0	7.44%	326.5	8.11%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.125e-01	1.0000	789.0	31.57%	1317.7	32.73%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.114e-01	1.0000	2050.0	82.03%	3340.0	82.96%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.113e-01	1.0000	1680.0	67.23%	2752.4	68.37%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.049e-01	1.0000	34.0	1.36%	67.4	1.67%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.016e-01	1.0000	416.0	16.65%	709.0	17.61%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.001e-01	1.0000	5.0	0.20%	13.1	0.33%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-9.874e-02	1.0000	440.0	17.61%	750.0	18.63%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-9.769e-02	1.0000	57.0	2.28%	108.2	2.69%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-8.816e-02	1.0000	131.0	5.24%	236.9	5.88%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-8.033e-02	1.0000	1144.0	45.78%	1899.9	47.19%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-7.998e-02	1.0000	167.0	6.68%	298.1	7.40%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-7.748e-02	1.0000	619.0	24.77%	1047.5	26.02%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-7.534e-02	1.0000	1418.0	56.74%	2341.4	58.16%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-7.473e-02	1.0000	1704.0	68.19%	2798.6	69.51%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-7.161e-02	1.0000	2.0	0.08%	7.2	0.18%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-7.071e-02	1.0000	1228.0	49.14%	2037.4	50.61%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.993e-02	1.0000	210.0	8.40%	372.7	9.26%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-6.823e-02	1.0000	5.0	0.20%	14.2	0.35%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.330e-02	1.0000	48.0	1.92%	95.1	2.36%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.330e-02	1.0000	48.0	1.92%	95.1	2.36%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-5.720e-02	1.0000	918.0	36.73%	1541.0	38.28%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-5.694e-02	1.0000	60.0	2.40%	117.1	2.91%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-5.321e-02	1.0000	887.0	35.49%	1491.3	37.04%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-5.182e-02	1.0000	1737.0	69.51%	2857.3	70.97%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-5.044e-02	1.0000	828.0	33.13%	1396.8	34.70%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-4.940e-02	1.0000	104.0	4.16%	195.5	4.86%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-4.932e-02	1.0000	140.0	5.60%	257.3	6.39%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-4.800e-02	1.0000	347.0	13.89%	606.4	15.06%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-4.573e-02	1.0000	417.0	16.69%	723.5	17.97%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-4.482e-02	1.0000	258.0	10.32%	458.8	11.40%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-4.415e-02	1.0000	465.0	18.61%	803.1	19.95%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-4.177e-02	1.0000	450.0	18.01%	779.1	19.35%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-4.058e-02	1.0000	268.0	10.72%	476.8	11.84%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-4.040e-02	1.0000	730.0	29.21%	1240.7	30.82%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-4.011e-02	1.0000	396.0	15.85%	690.5	17.15%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-3.914e-02	1.0000	192.0	7.68%	348.4	8.65%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-3.839e-02	1.0000	219.0	8.76%	394.7	9.80%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-3.837e-02	1.0000	48.0	1.92%	98.1	2.44%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-3.649e-02	1.0000	253.0	10.12%	452.5	11.24%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-3.273e-02	1.0000	164.0	6.56%	302.7	7.52%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-3.265e-02	1.0000	564.0	22.57%	971.5	24.13%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-3.118e-02	1.0000	13.0	0.52%	33.4	0.83%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-2.920e-02	1.0000	128.0	5.12%	241.2	5.99%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-2.599e-02	1.0000	65.0	2.60%	131.2	3.26%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-2.533e-02	1.0000	176.0	7.04%	325.6	8.09%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.506e-02	1.0000	735.0	29.41%	1256.8	31.22%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-2.433e-02	1.0000	1.0	0.04%	6.9	0.17%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.235e-02	1.0000	368.0	14.73%	651.4	16.18%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-2.142e-02	1.0000	36.0	1.44%	79.5	1.98%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-2.071e-02	1.0000	473.0	18.93%	827.2	20.55%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-2.039e-02	1.0000	45.0	1.80%	96.9	2.41%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.011e-02	1.0000	208.0	8.32%	382.8	9.51%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.898e-02	1.0000	182.0	7.28%	338.9	8.42%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.822e-02	1.0000	34.0	1.36%	76.4	1.90%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.816e-02	1.0000	557.0	22.29%	968.4	24.05%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.788e-02	1.0000	314.0	12.57%	563.2	13.99%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.718e-02	1.0000	565.0	22.61%	982.1	24.39%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.608e-02	1.0000	984.0	39.38%	1669.6	41.47%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.559e-02	1.0000	537.0	21.49%	937.6	23.29%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.450e-02	1.0000	350.0	14.01%	626.8	15.57%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.413e-02	1.0000	379.0	15.17%	675.6	16.78%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.338e-02	1.0000	232.0	9.28%	427.6	10.62%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.208e-02	1.0000	446.0	17.85%	790.0	19.62%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-1.169e-02	1.0000	85.0	3.40%	173.0	4.30%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.157e-02	1.0000	104.0	4.16%	206.0	5.12%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.118e-02	1.0000	547.0	21.89%	958.8	23.81%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-1.032e-02	1.0000	191.0	7.64%	359.9	8.94%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-9.693e-03	1.0000	131.0	5.24%	255.8	6.35%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-9.084e-03	1.0000	881.0	35.25%	1510.9	37.53%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-8.910e-03	1.0000	249.0	9.96%	460.9	11.45%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-8.270e-03	1.0000	91.0	3.64%	185.7	4.61%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-6.935e-03	1.0000	1177.0	47.10%	1994.2	49.53%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.814e-03	1.0000	427.0	17.09%	765.0	19.00%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-6.506e-03	1.0000	135.0	5.40%	265.6	6.60%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-6.244e-03	1.0000	169.0	6.76%	325.8	8.09%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-5.821e-03	1.0000	879.0	35.17%	1513.2	37.59%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-5.754e-03	1.0000	696.0	27.85%	1213.3	30.14%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-5.445e-03	1.0000	185.0	7.40%	354.4	8.80%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-5.120e-03	1.0000	793.0	31.73%	1375.0	34.15%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.257e-03	1.0000	252.0	10.08%	472.5	11.74%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-4.131e-03	1.0000	554.0	22.17%	982.8	24.41%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-3.887e-03	1.0000	1226.0	49.06%	2081.9	51.71%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-3.144e-03	1.0000	1352.0	54.10%	2286.2	56.79%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-3.103e-03	1.0000	479.0	19.17%	860.9	21.38%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.029e-03	1.0000	823.0	32.93%	1435.3	35.65%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-2.018e-03	1.0000	515.0	20.61%	925.3	22.98%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.837e-03	1.0000	253.0	10.12%	481.2	11.95%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.125e-03	1.0000	185.0	7.40%	366.8	9.11%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-9.100e-04	1.0000	109.0	4.36%	231.7	5.76%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-6.090e-04	1.0000	4.0	0.16%	22.3	0.55%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-4.610e-04	1.0000	249.0	9.96%	485.8	12.07%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-2.490e-04	1.0000	64.0	2.56%	153.7	3.82%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-2.460e-04	1.0000	842.0	33.69%	1490.5	37.02%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-2.440e-04	1.0000	618.0	24.73%	1119.8	27.81%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-2.110e-04	1.0000	510.0	20.41%	939.0	23.32%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.610e-04	1.0000	391.0	15.65%	739.4	18.37%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-9.100e-05	1.0000	814.0	32.57%	1454.0	36.12%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.500e-05	1.0000	381.0	15.25%	740.2	18.38%