Information for motif11


Reverse Opposite:

p-value:1e-16
log p-value:-3.871e+01
Information Content per bp:1.761
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif11.90%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets446.2 +/- 384.9bp
Average Position of motif in Background405.2 +/- 338.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CTTGTGGA-
---GTGGAT

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CTTGTGGA-----
--TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTTGTGGA----
NNTGTGGATTSS

MA0058.2_MAX/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGA-
CCATGTGCTT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGA---
NNHTGTGGTTWN

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGA-
CCATGTGCTT

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CTTGTGGA----
GGGCCGTGTGCAAAAA

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGTGGA----
CNNNTATTGTTCNNNNN

MA0002.2_RUNX1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGA--
GTCTGTGGTTT

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTTGTGGA
CCATTGTTNY