Information for motif14


Reverse Opposite:

p-value:1e-15
log p-value:-3.592e+01
Information Content per bp:1.837
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets346.9 +/- 299.1bp
Average Position of motif in Background614.4 +/- 617.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AATWGRTG-
NTATYGATCH

PH0107.1_Msx2/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AATWGRTG---
ANCGCTAATTGGTCTNN

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATWGRTG-
TAATTGATTA

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AATWGRTG---
NNNTTAATTGGTTTTT

MA0125.1_Nobox/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AATWGRTG
TAATTGGT-

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AATWGRTG--
CCTTAATNGNTTTT

PB0066.1_Sox17_1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AATWGRTG--
NNATNAATTGTTTNN

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AATWGRTG---
GNNTTAATTGGTTGTT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AATWGRTG
CCAAAAATAG---

MA0063.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AATWGRTG
TTAATTG---