| p-value: | 1e-13 |
| log p-value: | -3.169e+01 |
| Information Content per bp: | 1.653 |
| Number of Target Sequences with motif | 26.0 |
| Percentage of Target Sequences with motif | 12.38% |
| Number of Background Sequences with motif | 3.7 |
| Percentage of Background Sequences with motif | 2.18% |
| Average Position of motif in Targets | 464.7 +/- 541.4bp |
| Average Position of motif in Background | 512.5 +/- 94.6bp |
| Strand Bias (log2 ratio + to - strand density) | -0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.68
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAGACATGGA
CCAGACRSVB- |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------CAGACATGGA-
CAAATCCAGACATCACA |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.66
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAGACATGGA
CCAGACAG--- |
|
|
|
MA0106.2_TP53/Jaspar
| Match Rank: | 4 |
| Score: | 0.65
| | Offset: | -7
| | Orientation: | forward strand |
| Alignment: | -------CAGACATGGA
ACATGCCCAGACATG-- |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 5 |
| Score: | 0.64
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CAGACATGGA
BCAGACWA--- |
|
|
|
PH0082.1_Irx2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CAGACATGGA----
ANTNTTACATGTATNTA |
|
|
|
PH0083.1_Irx3_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CAGACATGGA-----
AAAATACATGTAATACT |
|
|
|
PH0086.1_Irx5/Jaspar
| Match Rank: | 8 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CAGACATGGA----
ANTNNTACATGTANNTN |
|
|
|
PH0084.1_Irx3_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CAGACATGGA----
NNTATTACATGTANNNT |
|
|
|
PH0085.1_Irx4/Jaspar
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CAGACATGGA----
NNTTTTACATGTANNNT |
|
|
|
