Information for motif19


Reverse Opposite:

p-value:1e-13
log p-value:-3.160e+01
Information Content per bp:1.679
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.48%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets292.1 +/- 395.8bp
Average Position of motif in Background390.7 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCCATTCCAKGA
-GCATTCCAGN-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCCATTCCAKGA
-RCATTCCWGG-

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCCATTCCAKGA------
---TTTCCTGGAAAGNNN

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GCCATTCCAKGA--
----TTCCNGGAAG

MA0137.3_STAT1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCCATTCCAKGA--
---TTTCCTGGAAA

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCCATTCCAKGA--
--NTTTCCNGGAAA

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCATTCCAKGA---
-NNCTTCCNGGAAGN

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCATTCCAKGA---
-NATTTCCNGGAAAT

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCCATTCCAKGA-
--ATTTCCAAGAA

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCATTCCAKGA--
NNNTCCATCCCATAANN