Information for motif22


Reverse Opposite:

p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.671
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif3.92%
Average Position of motif in Targets538.7 +/- 484.5bp
Average Position of motif in Background566.6 +/- 417.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCTGAAAAAC-
AAATAAGAAAAAAC

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTGAAAAAC
--TGGAAAA-

CHR/Cell-Cycle-Exp/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCTGAAAAAC
TTTGAAACCG

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAAAAAC
TTTCTNAGAAAN

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TCTGAAAAAC
GAAAAGGTGTGAAAATT

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCTGAAAAAC--
CCGTATTATAAACAA

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAAAAAC--------
NNCCTGNAAAAAAAAAAAAA

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAAAAAC--------
NNCCTGNAAAAAAAAAAAAA

MA0520.1_Stat6/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCTGAAAAAC--
ANTTCTCAGGAANNN

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCTGAAAAAC-
AAAGCTCGTAAAATTT