Information for motif24


Reverse Opposite:

p-value:1e-12
log p-value:-2.896e+01
Information Content per bp:1.685
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif20.95%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif6.08%
Average Position of motif in Targets430.3 +/- 473.1bp
Average Position of motif in Background457.6 +/- 409.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR/Cell-Cycle-Exp/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAACTCA
TTTGAAACCG-

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TTGAAACTCA
CAAAATCGAAACTAA

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGAAACTCA-
NCTGTCAATCAN

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAAACTCA
GGAAANTGAAACTNA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGAAACTCA
ACTGAAACCA-

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTGAAACTCA
GSCTGTCACTCA

MA0477.1_FOSL1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGAAACTCA--
-GGTGACTCATG

PB0142.1_Jundm2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAACTCA-----
NNGGTGACTCATCANN

MA0476.1_FOS/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGAAACTCA--
-TGTGACTCATT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTGAAACTCA----
--GAAAGTGAAAGT