Information for motif26


Reverse Opposite:

p-value:1e-12
log p-value:-2.883e+01
Information Content per bp:1.447
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif14.76%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif3.46%
Average Position of motif in Targets462.3 +/- 555.0bp
Average Position of motif in Background896.1 +/- 455.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGGCT
AACAGATGGC--

MA0143.3_Sox2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGGCT
AACAAAGG----

MA0514.1_Sox3/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGGGGCT
AAAACAAAGG----

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGGCT
AACAKATGGY--

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGGGGCT
AGAAGAACAAAGGACTA

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGGGGCT
ATAAGAACAAAGGACTA

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGGCT
AACAGATGGTCN

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGGCT
RACAAWGG----

MA0461.1_Atoh1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AACAGAGGGGCT
--CAGATGGC--

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACAGAGGGGCT
GAACAATGGN---