Information for motif29


Reverse Opposite:

p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.625
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets387.9 +/- 405.7bp
Average Position of motif in Background183.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0488.1_JUN/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TAGGATGATGTA--
-AAGATGATGTCAT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAGGATGATGTA---
AAAGATGATGTCATC

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAGGATGATGTA
CTACTAGGATGTNNTN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TAGGATGATGTA--
----ATGATGCAAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TAGGATGATGTA--
----MTGATGCAAT

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGATGATGTA--
--NGATGACGTCAT

MA0596.1_SREBF2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAGGATGATGTA
ATGGGGTGAT---

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAGGATGATGTA---
NNNNNATTGATGNGTGN

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAGGATGATGTA
ACAGGATGTGGT-

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGGATGATGTA-----
TNNNATGATTTCNNCNN