Information for motif30


Reverse Opposite:

p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.488
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif13.81%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets556.0 +/- 462.7bp
Average Position of motif in Background816.4 +/- 207.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCAGCTCCC-
CACAGCTGCAG

MA0500.1_Myog/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTCCC
NNGCAGCTGTC

MA0521.1_Tcf12/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTCCC
NNGCAGCTGTT

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCAGCTCCC--
ACCACATCCTGT

MA0499.1_Myod1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCAGCTCCC---
TGCAGCTGTCCCT

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCTCCC
NNACAGCTGC-

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCAGCTCCC
NAHCAGCTGD-

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCCAGCTCCC
--CAGCTGTT

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCAGCTCCC---
GAGCCCTTGTCCCTAA

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGCTCCC
NAACAGCTGT-