Information for motif36


Reverse Opposite:

p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.932
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif8.10%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets493.2 +/- 236.3bp
Average Position of motif in Background881.7 +/- 640.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TGTTCTTT---
NTNTTGTTGTTTGTN

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTCTTT--
NCNTTTGTTATTTNN

MA0007.2_AR/Jaspar

Match Rank:3
Score:0.71
Offset:-8
Orientation:reverse strand
Alignment:--------TGTTCTTT
GNACANNNTGTTCTT-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCTTT-
CTGTTCCTGG

MA0041.1_Foxd3/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGTTCTTT-
GAATGTTTGTTT

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGTTCTTT----
NNNTGTTGTTGTTNG

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGTTCTTT--
TAATTGTTCTAAAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTTCTTT------
NNTTTTGTTTTGATNT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTTCTTT------
TTTTTTTTCNNGTN

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TGTTCTTT-
AANTTATTGTTCTNNA