Information for motif39


Reverse Opposite:

p-value:1e-7
log p-value:-1.689e+01
Information Content per bp:1.889
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif12.38%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif3.82%
Average Position of motif in Targets408.0 +/- 330.3bp
Average Position of motif in Background448.2 +/- 297.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0042.1_Mafk_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAATGCT-----
TAAAAATGCTGACTT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGCT------
AAAWWTGCTGACWWD

MA0496.1_MAFK/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAATGCT-------
AAANTGCTGACTNAG

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAATGCT---
GAAAAAATTGCAAGG

MA0495.1_MAFF/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAATGCT--------
NAAAANTGCTGACTCAGC

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAAATGCT-
----NGCTN

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAATGCT-----
NNTAAAAACGATGTTNT

MA0442.1_SOX10/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAATGCT
ACAAAG--

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAATGCT--------
AAATTTGCTGACTTAGA

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------AAAATGCT
CTACCAATAAAATTCT