Information for motif41


Reverse Opposite:

p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.48%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif3.20%
Average Position of motif in Targets587.6 +/- 537.1bp
Average Position of motif in Background847.1 +/- 484.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0040.1_Foxq1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAAACTCTTT
AATAAACAATN-

MA0467.1_Crx/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAAACTCTTT
CTAATCCTCTT

MA0157.1_FOXO3/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAAACTCTTT
TGTAAACA----

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAAACTCTTT------
NNNACCTCATTATCNTN

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TAAACTCTTT--
NTAGTTAATCCCCTTAN

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TAAACTCTTT----
TACGAGACTCCTCTAAC

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TAAACTCTTT-
GATAATTAATCCCTCTT

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TAAACTCTTT------
GCAACCTCATTATNNNN

MA0074.1_RXRA::VDR/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TAAACTCTTT-----
TGAACCCGATGACCC

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TAAACTCTTT
CAAACGTAAACAAT--