Information for motif44


Reverse Opposite:

p-value:1e-3
log p-value:-9.010e+00
Information Content per bp:1.981
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.19%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets325.5 +/- 337.6bp
Average Position of motif in Background322.5 +/- 163.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CAGGAGCT
-CGGAGC-

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAGCT
ANCAGGATGT

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CAGGAGCT---
ATGTACAGTAGCAAAG

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CAGGAGCT---
ATTTACAGTAGCAAAA

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAGGAGCT----
ATCCACAGGTGCGAAAA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAGCT
NNCAGGTGNN

MA0156.1_FEV/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAGGAGCT
CAGGAAAT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAGCT
NACAGGAAAT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGGAGCT
NACAGGAAAT

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGGAGCT
AACAGGAAGT