Information for motif6


Reverse Opposite:

p-value:1e-21
log p-value:-5.015e+01
Information Content per bp:1.730
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif2.99%
Average Position of motif in Targets444.7 +/- 407.6bp
Average Position of motif in Background671.6 +/- 284.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTCTGGGAT--
-TTCTTGGAAAN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTTCTGGGAT
GGTCTGGCAT

MA0144.2_STAT3/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTTCTGGGAT-
CTTCTGGGAAA

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTTCTGGGAT--
RGSMTBCTGGGAAAT

MA0137.3_STAT1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTTCTGGGAT-
TTTCCAGGAAA

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTTCTGGGAT------
TATTATGGGATGGATAA

MA0518.1_Stat4/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTTCTGGGAT----
TTTCCAGGAAATGG

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTTCTGGGAT--
--CSTGGGAAAD

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTCTGGGAT
CTTCCNGGAA

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTCTGGGAT--
TTTCTNAGAAAN