Information for motif7


Reverse Opposite:

p-value:1e-21
log p-value:-4.879e+01
Information Content per bp:1.718
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif10.95%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets312.6 +/- 352.8bp
Average Position of motif in Background256.8 +/- 159.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGATCTAAG
NTGCAGCTGTG--

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCAGATCTAAG
BAACAGCTGT---

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCAGATCTAAG---
---ACATCAAAGGNA

MA0523.1_TCF7L2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCAGATCTAAG---
-AAAGATCAAAGGAA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGCAGATCTAAG-
---ACATCAAAGG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGATCTAAG
CAGCAGCTGN---

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCAGATCTAAG
ANCAGCTG----

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCAGATCTAAG-
---ACWTCAAAGG

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGATCTAAG
NNAGCAGCTGCT--

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGATCTAAG-
NNNNAGCAGCTGCTGAN