Information for motif9


Reverse Opposite:

p-value:1e-18
log p-value:-4.367e+01
Information Content per bp:1.852
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif12.86%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets398.8 +/- 367.3bp
Average Position of motif in Background281.8 +/- 227.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTAG
CATGAC---

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTAG--
CTTGAGTGGCT

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------ATGAGTAG--
GACGATAATGAGCTTGC

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGAGTAG-
TTAAGTGGA

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGAGTAG
-TAAGTAT

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------ATGAGTAG--
AAACATAATGAGGTTGC

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTAG
GGTAAGTA-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTAG-
CSTGGGAAAD

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGAGTAG--
TTGAGTGSTT

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATGAGTAG-----
TAAACTGATAAGAAGAT