Information for motif1


Reverse Opposite:

p-value:1e-30
log p-value:-7.025e+01
Information Content per bp:1.678
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif8.84%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets355.2 +/- 305.6bp
Average Position of motif in Background418.6 +/- 74.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0029.1_Mecom/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GATCTTGTTT-
TNTTATCTTATCTT

MA0480.1_Foxo1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GATCTTGTTT---
--TCCTGTTTACA

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GATCTTGTTT-
NNNNATGACCTTGANTN

MA0084.1_SRY/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GATCTTGTTT--
---ATTGTTTAN

MA0592.1_ESRRA/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GATCTTGTTT
NGTGACCTTGG--

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GATCTTGTTT------
NNTTTTGTTTTGATNT

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATCTTGTTT---
NTNTTGTTGTTTGTN

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GATCTTGTTT----
--NYYTGTTTACHN

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATCTTGTTT
NTGACCTTGA--

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GATCTTGTTT-------
NNNTTTGTTTACNTTNN