| p-value: | 1e-13 |
| log p-value: | -3.173e+01 |
| Information Content per bp: | 1.897 |
| Number of Target Sequences with motif | 70.0 |
| Percentage of Target Sequences with motif | 21.34% |
| Number of Background Sequences with motif | 23.9 |
| Percentage of Background Sequences with motif | 8.14% |
| Average Position of motif in Targets | 364.5 +/- 331.1bp |
| Average Position of motif in Background | 428.6 +/- 345.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.23 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.85
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GTGACAGA--
AGGTGHCAGACA |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 2 |
| Score: | 0.81
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GTGACAGA---
AGGTGNCAGACAG |
|
|
|
MA0498.1_Meis1/Jaspar
| Match Rank: | 3 |
| Score: | 0.78
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GTGACAGA-
NNNTGAGTGACAGCT |
|
|
|
PH0141.1_Pknox2/Jaspar
| Match Rank: | 4 |
| Score: | 0.69
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTGACAGA-----
NNATTGACAGGTGCTT |
|
|
|
PH0169.1_Tgif1/Jaspar
| Match Rank: | 5 |
| Score: | 0.68
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GTGACAGA-----
GATATTGACAGCTGCGT |
|
|
|
MA0067.1_Pax2/Jaspar
| Match Rank: | 6 |
| Score: | 0.67
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GTGACAGA
NCGTGACN-- |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
| Match Rank: | 7 |
| Score: | 0.66
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTGACAGA-
TGAGTGACAGSC |
|
|
|
PH0105.1_Meis3/Jaspar
| Match Rank: | 8 |
| Score: | 0.66
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTGACAGA-----
GTATTGACAGGTNNTT |
|
|
|
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 9 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GTGACAGA
AGGTGTCA-- |
|
|
|
MA0100.2_Myb/Jaspar
| Match Rank: | 10 |
| Score: | 0.66
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GTGACAGA---
-TGGCAGTTGN |
|
|
|
