Information for motif24


Reverse Opposite:

p-value:1e-13
log p-value:-3.024e+01
Information Content per bp:1.863
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets332.2 +/- 351.7bp
Average Position of motif in Background256.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGGAGCCT
CGGAGC--

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAGCCT----
NTNNNAGGAGTCTCNTN

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAGCCT----
NNNNTTGGCGCCGANNN

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGCCT
GTGGAT---

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAGCCT----
NNNNTTGGCGCCGANNN

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGAGCCT
--CAGCC-

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAGCCT
NGAAGC--

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGAGCCT----
NNATTGGACTTTNGNN

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGGAGCCT-
GGGGCCGAGGCCTG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGAGCCT--
--TWGTCTGV