Information for motif26


Reverse Opposite:

p-value:1e-12
log p-value:-2.931e+01
Information Content per bp:1.509
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif9.15%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets357.5 +/- 373.8bp
Average Position of motif in Background423.3 +/- 257.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATTGAGTGA
NNNNNGAACAATTGANN--

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAATTGAGTGA
ATAAACAATTAAACA-

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACAATTGAGTGA----
-TAATTCAATGAAGTG

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTGAGTGA
NNCNNAACAATTNT----

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ACAATTGAGTGA
TAGTGAACAATAGATTT-

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATTGAGTGA
NNTNANAACAATTNNA---

PH0009.1_Bsx/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACAATTGAGTGA-
CAGGTAATTACCTCAG

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACAATTGAGTGA
AATGAACAATGGAATT-

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAATTGAGTGA
RNAACAATGG-----

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACAATTGAGTGA--
AATCAATTCAATAATT