Information for motif33


Reverse Opposite:

p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif7.62%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets479.2 +/- 377.3bp
Average Position of motif in Background518.4 +/- 377.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGCCACGGCT---
NNGGCCACGCCTTTN

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCCACGGCT
ATCCAC----

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGCCACGGCT
CCGCATAGCAACGGA-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACGGCT
AAACCACAGC-

MA0067.1_Pax2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCACGGCT
AGTCACGC--

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGCCACGGCT-
------NGCTN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCACGGCT
AAACCACANN-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCCACGGCT-
-GCCMCRCCCH

MA0002.2_RUNX1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCCACGGCT
AAACCACAGAN

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCCACGGCT
--GCACGTNC