Information for motif34


Reverse Opposite:

p-value:1e-10
log p-value:-2.415e+01
Information Content per bp:1.837
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif9.76%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets407.6 +/- 350.8bp
Average Position of motif in Background633.1 +/- 288.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ACCAACTM-----
GAAGACCAATTAGCGCT

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACCAACTM----
AAAAACCAATTAAGAA

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACCAACTM-----
CGACCAACTGCCGTG

PH0005.1_Barhl1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACCAACTM----
AACAACCAATTAATTC

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACCAACTM----
CAAAACCAATTAATTT

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACCAACTM------
CGACCAACTGCCATGC

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACCAACTM--
CGACCATCTGTT

MA0461.1_Atoh1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACCAACTM
GCCATCTG

MA0125.1_Nobox/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACCAACTM
ACCAATTA

MA0161.1_NFIC/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACCAACTM
TGCCAA---