Information for motif38


Reverse Opposite:

p-value:1e-7
log p-value:-1.807e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif5.49%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets455.5 +/- 413.3bp
Average Position of motif in Background534.5 +/- 145.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATGAAGCTGTC-----
-AACTAGCTGTCAATAC

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GATGAAGCTGTC------
-NNNCAGCTGTCAATATN

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GATGAAGCTGTC-----
-AACGAGCTGTCAATAC

MA0498.1_Meis1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GATGAAGCTGTC--------
-----AGCTGTCACTCACCT

MA0522.1_Tcf3/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATGAAGCTGTC
-NTGCAGCTGTG

MA0521.1_Tcf12/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATGAAGCTGTC
-NNGCAGCTGTT

MA0499.1_Myod1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GATGAAGCTGTC---
--TGCAGCTGTCCCT

MA0500.1_Myog/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GATGAAGCTGTC
-NNGCAGCTGTC

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATGAAGCTGTC-----
-AAAGACCTGTCAATAC

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATGAAGCTGTC-----
-AATTACCTGTCAATAC