Information for motif7


Reverse Opposite:

p-value:1e-24
log p-value:-5.712e+01
Information Content per bp:1.865
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif7.62%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets347.3 +/- 286.8bp
Average Position of motif in Background323.9 +/- 303.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GACCACACAG-
GGACCACCCACG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GACCACACAG
NWAACCACADNN

MA0002.2_RUNX1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCACACAG
AAACCACAGAN

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACCACACAG---
CAAACCACAAACCCC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACCACACAG
NAAACCACAG--

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACCACACAG
AAACCACAGC-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GACCACACAG
AAACCACANN-

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GACCACACAG
--CCAGACAG

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GACCACACAG-
-----CACAGN

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GACCACACAG----
CAAATCCAGACATCACA