Information for motif8


Reverse Opposite:

p-value:1e-23
log p-value:-5.382e+01
Information Content per bp:1.773
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif9.15%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets420.3 +/- 417.4bp
Average Position of motif in Background235.0 +/- 105.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0596.1_SREBF2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:YTCASAGCAT
ATCACCCCAT

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:YTCASAGCAT
ATCACCCCAC

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:YTCASAGCAT
ATCACCCCAT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---YTCASAGCAT----
AATCGCACTGCATTCCG

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--YTCASAGCAT
CNGTCACGCCAC

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-YTCASAGCAT----
GAGCACAGCAGGACA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YTCASAGCAT
GCCTCAGGGCAT

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-YTCASAGCAT----
CCACACAGCAGGAGA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YTCASAGCAT
AAATCACTGC--

MA0003.2_TFAP2A/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------YTCASAGCAT
CATTGCCTCAGGGCA-