Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 328)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 293)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-9	-2.258e+01	0.0000	65.0	19.82%	25.3	8.63%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-7	-1.634e+01	0.0000	69.0	21.04%	32.9	11.23%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-6	-1.450e+01	0.0000	29.0	8.84%	9.5	3.24%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-3	-8.752e+00	0.0078	7.0	2.13%	0.9	0.30%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-3	-8.752e+00	0.0078	7.0	2.13%	2.0	0.67%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-3	-8.645e+00	0.0078	30.0	9.15%	13.1	4.48%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-3	-7.768e+00	0.0149	19.0	5.79%	7.6	2.60%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e-3	-7.767e+00	0.0149	38.0	11.59%	19.2	6.54%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-2	-5.373e+00	0.1268	157.0	47.87%	119.9	40.90%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-2	-5.300e+00	0.1268	136.0	41.46%	101.7	34.70%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-2	-5.161e+00	0.1283	5.0	1.52%	0.0	0.00%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-2	-5.079e+00	0.1283	107.0	32.62%	77.7	26.51%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1	-4.589e+00	0.1923	69.0	21.04%	47.3	16.12%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-1	-4.142e+00	0.2792	10.0	3.05%	4.6	1.57%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-3.957e+00	0.3135	13.0	3.96%	7.0	2.39%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-1	-3.864e+00	0.3226	52.0	15.85%	35.9	12.24%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-1	-3.637e+00	0.3811	6.0	1.83%	2.5	0.85%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-1	-3.580e+00	0.3811	71.0	21.65%	51.3	17.49%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-1	-3.525e+00	0.3813	123.0	37.50%	95.0	32.41%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-1	-3.486e+00	0.3813	21.0	6.40%	12.2	4.15%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-1	-3.056e+00	0.5516	62.0	18.90%	45.9	15.65%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e-1	-3.029e+00	0.5516	32.0	9.76%	21.7	7.40%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-1	-2.918e+00	0.5778	13.0	3.96%	7.6	2.60%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-1	-2.802e+00	0.6221	188.0	57.32%	155.3	52.99%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-2.638e+00	0.7036	31.0	9.45%	22.0	7.50%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-1	-2.552e+00	0.7371	42.0	12.80%	30.7	10.48%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-1	-2.467e+00	0.7726	107.0	32.62%	85.5	29.17%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-1	-2.456e+00	0.7726	93.0	28.35%	73.6	25.09%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-1	-2.339e+00	0.8178	20.0	6.10%	13.6	4.63%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-2.288e+00	0.8323	25.0	7.62%	17.7	6.04%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-2.271e+00	0.8323	3.0	0.91%	1.6	0.56%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.271e+00	0.8323	3.0	0.91%	1.5	0.51%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-2.235e+00	0.8323	130.0	39.63%	106.4	36.31%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.187e+00	0.8323	9.0	2.74%	5.2	1.79%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-2.173e+00	0.8323	73.0	22.26%	57.5	19.60%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.069e+00	0.8631	56.0	17.07%	43.3	14.77%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.020e+00	0.8816	77.0	23.48%	61.3	20.93%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.019e+00	0.8816	28.0	8.54%	20.1	6.87%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.985e+00	0.8816	78.0	23.78%	62.3	21.26%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.964e+00	0.8816	93.0	28.35%	75.8	25.85%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.928e+00	0.8816	19.0	5.79%	13.5	4.61%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.921e+00	0.8816	160.0	48.78%	134.1	45.76%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.853e+00	0.8972	36.0	10.98%	27.2	9.27%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.850e+00	0.8972	42.0	12.80%	32.5	11.08%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.831e+00	0.8972	90.0	27.44%	73.2	24.97%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-1.769e+00	0.9122	50.0	15.24%	39.0	13.32%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.690e+00	0.9657	33.0	10.06%	25.4	8.65%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.680e+00	0.9657	73.0	22.26%	59.2	20.20%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.672e+00	0.9657	4.0	1.22%	2.5	0.84%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.672e+00	0.9657	4.0	1.22%	2.6	0.89%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.666e+00	0.9657	22.0	6.71%	16.8	5.75%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.661e+00	0.9657	12.0	3.66%	8.7	2.96%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.646e+00	0.9657	17.0	5.18%	12.3	4.18%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.615e+00	0.9657	148.0	45.12%	125.6	42.85%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.611e+00	0.9657	54.0	16.46%	43.0	14.67%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.601e+00	0.9657	41.0	12.50%	32.3	11.00%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.551e+00	0.9657	70.0	21.34%	57.0	19.45%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.548e+00	0.9657	13.0	3.96%	9.4	3.22%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.494e+00	0.9657	37.0	11.28%	29.7	10.14%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.485e+00	0.9657	19.0	5.79%	14.9	5.09%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.482e+00	0.9657	65.0	19.82%	53.9	18.37%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.451e+00	0.9657	89.0	27.13%	75.0	25.57%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.418e+00	0.9657	20.0	6.10%	15.2	5.18%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.396e+00	0.9657	5.0	1.52%	3.6	1.24%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.344e+00	0.9869	34.0	10.37%	27.4	9.34%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.311e+00	1.0000	129.0	39.33%	110.8	37.80%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.299e+00	1.0000	16.0	4.88%	12.3	4.18%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.248e+00	1.0000	11.0	3.35%	8.0	2.74%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.182e+00	1.0000	77.0	23.48%	65.2	22.25%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.177e+00	1.0000	2.0	0.61%	0.9	0.30%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.177e+00	1.0000	2.0	0.61%	1.0	0.35%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.177e+00	1.0000	2.0	0.61%	0.7	0.25%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.170e+00	1.0000	111.0	33.84%	95.2	32.47%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.112e+00	1.0000	7.0	2.13%	5.8	1.96%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.105e+00	1.0000	13.0	3.96%	10.9	3.70%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.093e+00	1.0000	34.0	10.37%	28.1	9.60%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.093e+00	1.0000	34.0	10.37%	28.1	9.60%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.056e+00	1.0000	163.0	49.70%	142.3	48.55%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.025e+00	1.0000	8.0	2.44%	6.1	2.09%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.013e+00	1.0000	69.0	21.04%	59.4	20.26%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-9.751e-01	1.0000	71.0	21.65%	61.3	20.93%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-9.599e-01	1.0000	89.0	27.13%	77.4	26.40%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-9.523e-01	1.0000	107.0	32.62%	93.1	31.77%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-9.470e-01	1.0000	3.0	0.91%	2.8	0.95%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-9.048e-01	1.0000	25.0	7.62%	21.6	7.39%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-8.998e-01	1.0000	10.0	3.05%	8.0	2.73%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-8.998e-01	1.0000	10.0	3.05%	8.6	2.92%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-8.425e-01	1.0000	79.0	24.09%	69.7	23.79%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-8.372e-01	1.0000	4.0	1.22%	3.3	1.13%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-8.257e-01	1.0000	45.0	13.72%	39.7	13.54%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-8.220e-01	1.0000	181.0	55.18%	160.9	54.89%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-8.011e-01	1.0000	29.0	8.84%	25.0	8.54%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-7.788e-01	1.0000	30.0	9.15%	26.4	9.01%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-7.468e-01	1.0000	95.0	28.96%	84.9	28.95%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-7.434e-01	1.0000	14.0	4.27%	12.7	4.32%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-7.419e-01	1.0000	123.0	37.50%	109.3	37.30%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-7.386e-01	1.0000	50.0	15.24%	44.3	15.11%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-7.297e-01	1.0000	78.0	23.78%	69.8	23.80%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-6.784e-01	1.0000	138.0	42.07%	123.9	42.28%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-6.764e-01	1.0000	7.0	2.13%	6.5	2.20%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-6.764e-01	1.0000	7.0	2.13%	6.7	2.28%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-6.704e-01	1.0000	64.0	19.51%	57.4	19.60%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-6.451e-01	1.0000	66.0	20.12%	59.3	20.23%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-6.451e-01	1.0000	66.0	20.12%	60.0	20.46%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-6.230e-01	1.0000	29.0	8.84%	26.2	8.93%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-6.173e-01	1.0000	49.0	14.94%	45.0	15.34%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-6.095e-01	1.0000	69.0	21.04%	62.7	21.39%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-5.929e-01	1.0000	41.0	12.50%	37.3	12.71%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-5.921e-01	1.0000	31.0	9.45%	28.5	9.71%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-5.921e-01	1.0000	31.0	9.45%	28.1	9.60%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-5.871e-01	1.0000	71.0	21.65%	64.2	21.89%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-5.802e-01	1.0000	91.0	27.74%	82.6	28.18%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-5.776e-01	1.0000	32.0	9.76%	29.3	9.99%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-5.735e-01	1.0000	82.0	25.00%	74.1	25.26%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-5.707e-01	1.0000	22.0	6.71%	20.2	6.91%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-5.673e-01	1.0000	121.0	36.89%	109.4	37.31%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-5.566e-01	1.0000	64.0	19.51%	58.5	19.97%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-5.169e-01	1.0000	14.0	4.27%	13.4	4.58%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-5.137e-01	1.0000	26.0	7.93%	24.3	8.29%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-5.019e-01	1.0000	15.0	4.57%	14.5	4.94%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-4.880e-01	1.0000	16.0	4.88%	15.9	5.42%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-4.798e-01	1.0000	51.0	15.55%	47.8	16.29%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-4.628e-01	1.0000	18.0	5.49%	17.3	5.92%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-4.403e-01	1.0000	155.0	47.26%	141.0	48.11%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-4.365e-01	1.0000	33.0	10.06%	31.9	10.88%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-4.335e-01	1.0000	45.0	13.72%	42.6	14.54%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-4.219e-01	1.0000	2.0	0.61%	2.0	0.68%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-4.219e-01	1.0000	2.0	0.61%	2.6	0.88%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.162e-01	1.0000	5.0	1.52%	5.4	1.84%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.162e-01	1.0000	5.0	1.52%	5.4	1.84%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-4.146e-01	1.0000	230.0	70.12%	208.9	71.26%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-4.057e-01	1.0000	231.0	70.43%	209.4	71.45%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-3.944e-01	1.0000	8.0	2.44%	8.7	2.97%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-3.944e-01	1.0000	8.0	2.44%	8.1	2.75%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-3.943e-01	1.0000	1.0	0.30%	1.3	0.43%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-3.943e-01	1.0000	1.0	0.30%	0.0	0.00%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-3.943e-01	1.0000	1.0	0.30%	1.3	0.43%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-3.927e-01	1.0000	25.0	7.62%	24.1	8.21%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-3.877e-01	1.0000	94.0	28.66%	87.3	29.78%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-3.869e-01	1.0000	9.0	2.74%	9.3	3.17%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-3.869e-01	1.0000	9.0	2.74%	9.3	3.17%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-3.651e-01	1.0000	12.0	3.66%	12.6	4.29%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-3.651e-01	1.0000	12.0	3.66%	12.5	4.27%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-3.623e-01	1.0000	108.0	32.93%	100.5	34.28%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-3.596e-01	1.0000	66.0	20.12%	62.8	21.41%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-3.537e-01	1.0000	30.0	9.15%	29.3	9.99%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-3.325e-01	1.0000	206.0	62.80%	188.9	64.44%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-3.262e-01	1.0000	18.0	5.49%	18.9	6.45%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-3.111e-01	1.0000	85.0	25.91%	80.6	27.49%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-2.987e-01	1.0000	98.0	29.88%	92.9	31.70%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-2.776e-01	1.0000	102.0	31.10%	96.8	33.03%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-2.698e-01	1.0000	70.0	21.34%	67.1	22.90%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-2.639e-01	1.0000	94.0	28.66%	89.1	30.40%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-2.567e-01	1.0000	47.0	14.33%	46.3	15.80%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.554e-01	1.0000	73.0	22.26%	70.4	24.01%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.497e-01	1.0000	97.0	29.57%	92.8	31.66%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-2.477e-01	1.0000	49.0	14.94%	48.7	16.63%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-2.401e-01	1.0000	88.0	26.83%	84.9	28.96%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.369e-01	1.0000	10.0	3.05%	11.0	3.76%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-2.364e-01	1.0000	9.0	2.74%	10.4	3.54%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.361e-01	1.0000	100.0	30.49%	95.7	32.66%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-2.294e-01	1.0000	16.0	4.88%	17.3	5.90%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-2.294e-01	1.0000	16.0	4.88%	17.1	5.84%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.200e-01	1.0000	20.0	6.10%	21.7	7.42%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.156e-01	1.0000	70.0	21.34%	68.2	23.25%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-2.149e-01	1.0000	22.0	6.71%	23.2	7.92%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-2.134e-01	1.0000	116.0	35.37%	110.5	37.68%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-2.115e-01	1.0000	43.0	13.11%	43.5	14.83%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.913e-01	1.0000	3.0	0.91%	4.4	1.49%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.867e-01	1.0000	90.0	27.44%	87.0	29.69%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.856e-01	1.0000	162.0	49.39%	152.1	51.88%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.731e-01	1.0000	94.0	28.66%	91.9	31.36%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.518e-01	1.0000	17.0	5.18%	19.4	6.62%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.518e-01	1.0000	16.0	4.88%	18.5	6.30%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.499e-01	1.0000	21.0	6.40%	23.7	8.10%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.434e-01	1.0000	27.0	8.23%	29.1	9.94%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.401e-01	1.0000	9.0	2.74%	11.7	4.00%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.396e-01	1.0000	81.0	24.70%	80.1	27.33%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.389e-01	1.0000	52.0	15.85%	53.1	18.13%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.355e-01	1.0000	8.0	2.44%	10.0	3.42%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-1.330e-01	1.0000	139.0	42.38%	133.7	45.63%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.295e-01	1.0000	85.0	25.91%	84.0	28.66%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.240e-01	1.0000	59.0	17.99%	60.5	20.65%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.237e-01	1.0000	40.0	12.20%	42.5	14.51%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.228e-01	1.0000	100.0	30.49%	98.4	33.55%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.122e-01	1.0000	65.0	19.82%	66.8	22.80%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.109e-01	1.0000	48.0	14.63%	50.6	17.26%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-9.898e-02	1.0000	17.0	5.18%	20.6	7.02%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-9.552e-02	1.0000	34.0	10.37%	37.6	12.84%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-8.965e-02	1.0000	62.0	18.90%	64.3	21.92%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-8.421e-02	1.0000	3.0	0.91%	5.5	1.87%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-8.259e-02	1.0000	67.0	20.43%	69.2	23.62%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-8.199e-02	1.0000	48.0	14.63%	51.3	17.50%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-8.176e-02	1.0000	96.0	29.27%	96.8	33.02%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-7.776e-02	1.0000	52.0	15.85%	55.2	18.84%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-7.036e-02	1.0000	59.0	17.99%	62.7	21.38%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-6.921e-02	1.0000	137.0	41.77%	134.6	45.93%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-6.841e-02	1.0000	26.0	7.93%	30.2	10.31%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-6.593e-02	1.0000	20.0	6.10%	24.4	8.33%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-6.558e-02	1.0000	38.0	11.59%	42.7	14.56%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-6.295e-02	1.0000	2.0	0.61%	4.0	1.37%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-5.372e-02	1.0000	12.0	3.66%	16.0	5.47%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-4.633e-02	1.0000	29.0	8.84%	34.6	11.82%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-4.571e-02	1.0000	39.0	11.89%	44.1	15.06%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-4.462e-02	1.0000	9.0	2.74%	13.1	4.48%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-4.419e-02	1.0000	100.0	30.49%	102.5	34.97%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-4.290e-02	1.0000	21.0	6.40%	26.0	8.88%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-4.079e-02	1.0000	8.0	2.44%	12.7	4.33%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-3.765e-02	1.0000	79.0	24.09%	83.1	28.34%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-3.652e-02	1.0000	7.0	2.13%	11.9	4.08%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-3.566e-02	1.0000	161.0	49.09%	158.9	54.21%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-3.321e-02	1.0000	196.0	59.76%	189.9	64.77%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-3.286e-02	1.0000	13.0	3.96%	18.8	6.41%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-3.075e-02	1.0000	29.0	8.84%	35.3	12.04%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-2.351e-02	1.0000	17.0	5.18%	23.5	8.03%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-2.136e-02	1.0000	38.0	11.59%	45.3	15.46%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.129e-02	1.0000	8.0	2.44%	14.0	4.77%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.087e-02	1.0000	4.0	1.22%	8.8	3.00%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.087e-02	1.0000	33.0	10.06%	40.9	13.96%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.439e-02	1.0000	43.0	13.11%	51.8	17.68%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-1.431e-02	1.0000	40.0	12.20%	49.0	16.71%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.424e-02	1.0000	49.0	14.94%	57.9	19.74%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.387e-02	1.0000	35.0	10.67%	43.2	14.72%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.387e-02	1.0000	35.0	10.67%	44.0	14.99%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.383e-02	1.0000	17.0	5.18%	24.3	8.30%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.357e-02	1.0000	33.0	10.06%	41.3	14.11%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.339e-02	1.0000	32.0	9.76%	40.3	13.74%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.219e-02	1.0000	15.0	4.57%	22.9	7.81%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.129e-02	1.0000	14.0	4.27%	21.0	7.18%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-9.057e-03	1.0000	4.0	1.22%	9.6	3.27%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-7.376e-03	1.0000	16.0	4.88%	24.1	8.23%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-6.456e-03	1.0000	101.0	30.79%	109.3	37.29%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-4.160e-03	1.0000	53.0	16.16%	64.9	22.14%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-4.104e-03	1.0000	47.0	14.33%	58.8	20.05%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-3.719e-03	1.0000	93.0	28.35%	103.3	35.24%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-1.564e-03	1.0000	4.0	1.22%	11.3	3.85%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.074e-03	1.0000	11.0	3.35%	21.5	7.33%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-4.610e-04	1.0000	26.0	7.93%	40.6	13.85%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-3.590e-04	1.0000	1.0	0.30%	7.4	2.51%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-3.340e-04	1.0000	30.0	9.15%	45.1	15.40%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-2.590e-04	1.0000	60.0	18.29%	77.3	26.37%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-1.530e-04	1.0000	37.0	11.28%	54.9	18.73%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.090e-04	1.0000	6.0	1.83%	17.5	5.97%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-2.000e-06	1.0000	75.0	22.87%	101.4	34.58%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.38%