Information for motif10


Reverse Opposite:

p-value:1e-17
log p-value:-4.041e+01
Information Content per bp:1.678
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif15.02%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets468.9 +/- 481.0bp
Average Position of motif in Background230.8 +/- 154.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAATCC-
ACTACAATTCCC

CHR/Cell-Cycle-Exp/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAATCC
CGGTTTCAAA---

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAATCC
ACATCAAAGG-

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAATCC
ACWTCAAAGG-

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAATCC
GCTTCC-----

MA0038.1_Gfi1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTCAAATCC---
---CAAATCACTG

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTCAAATCC-
GTTTCACTTCCG

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CTTCAAATCC
TAAGCCACTTGAAATT-

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTTCAAATCC--
----TAATCCCN

MA0523.1_TCF7L2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAATCC-
AAAGATCAAAGGAA