Information for motif18


Reverse Opposite:

p-value:1e-14
log p-value:-3.293e+01
Information Content per bp:1.666
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif11.27%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets319.2 +/- 272.9bp
Average Position of motif in Background328.6 +/- 168.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAGCATTTT
CAAGCTT---

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAAGCATTTT--
-AAGGATATNTN

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCATTTT--
AAGTCAGCANTTTTN

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCATTTT----
CCTTGCAATTTTTNN

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAGCATTTT
-AATTATT--

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CAAGCATTTT-
ATGGTTCAATAATTTTG

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAAGCATTTT
GAAGATCAATCACTTA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAAGCATTTT-
HWWGTCAGCAWWTTT

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCATTTT---
CNTTAAGTACTTAANG

MA0095.2_YY1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCATTTT-
GCNGCCATCTTG