Information for motif2


Reverse Opposite:

p-value:1e-25
log p-value:-5.773e+01
Information Content per bp:1.598
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif17.37%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif2.03%
Average Position of motif in Targets471.8 +/- 461.8bp
Average Position of motif in Background479.0 +/- 260.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0462.1_BATF::JUN/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GRRAATGACTCA
-GAAATGACTCA

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GRRAATGACTCA-
AGGAGATGACTCAT

MA0476.1_FOS/Jaspar

Match Rank:3
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GRRAATGACTCA--
---NATGAGTCANN

MA0490.1_JUNB/Jaspar

Match Rank:4
Score:0.80
Offset:2
Orientation:forward strand
Alignment:GRRAATGACTCA-
--GGATGACTCAT

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:5
Score:0.80
Offset:3
Orientation:forward strand
Alignment:GRRAATGACTCA---
---DATGASTCATHN

MA0478.1_FOSL2/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GRRAATGACTCA-
--GGATGACTCAT

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.79
Offset:3
Orientation:forward strand
Alignment:GRRAATGACTCA-
---DATGASTCAT

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GRRAATGACTCA--
--NNATGAGTCATN

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.78
Offset:4
Orientation:forward strand
Alignment:GRRAATGACTCA--
----ATGACTCATC

MA0477.1_FOSL1/Jaspar

Match Rank:10
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GRRAATGACTCA--
---GGTGACTCATG