Information for motif21


Reverse Opposite:

p-value:1e-13
log p-value:-3.184e+01
Information Content per bp:1.512
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif9.86%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets478.5 +/- 490.0bp
Average Position of motif in Background355.4 +/- 157.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0021.1_Gata3_1/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCAACTCTACTC--------
NNTNANTTCTTATCTCTANANN

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TCAACTCTACTC---
-------TACTNNNN

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCAACTCTACTC---
TGACCTTTGCCCTAN

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TCAACTCTACTC--
-----NCCACTTAN

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCAACTCTACTC------
-NNANTCTTATCTNNNNN

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TCAACTCTACTC-
CNGACACCTGTTCNNN

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TCAACTCTACTC--
TGACCTTTGCCCTA

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCAACTCTACTC
TGACCTTTNCNT

MA0017.1_NR2F1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TCAACTCTACTC--
TGACCTTTGAACCT

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TCAACTCTACTC--
TGACCTTTGCCCCA