| p-value: | 1e-13 |
| log p-value: | -3.160e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 18.0 |
| Percentage of Target Sequences with motif | 8.45% |
| Number of Background Sequences with motif | 2.9 |
| Percentage of Background Sequences with motif | 1.00% |
| Average Position of motif in Targets | 413.2 +/- 356.6bp |
| Average Position of motif in Background | 469.9 +/- 410.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.06 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PH0141.1_Pknox2/Jaspar
| Match Rank: | 1 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CATTGACAAGCA---
NNATTGACAGGTGCTT |
|
|
|
MA0142.1_Pou5f1::Sox2/Jaspar
| Match Rank: | 2 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CATTGACAAGCA---
CTTTGTTATGCAAAT |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 3 |
| Score: | 0.61
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CATTGACAAGCA
--TTGCCAAG-- |
|
|
|
PH0105.1_Meis3/Jaspar
| Match Rank: | 4 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CATTGACAAGCA---
GTATTGACAGGTNNTT |
|
|
|
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 5 |
| Score: | 0.60
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CATTGACAAGCA---
CATTGTTATGCAAAT |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
| Match Rank: | 6 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CATTGACAAGCA
TGAGTGACAGSC- |
|
|
|
PH0104.1_Meis2/Jaspar
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CATTGACAAGCA---
NTATTGACAGGTNNTN |
|
|
|
PB0022.1_Gata5_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CATTGACAAGCA---
TAAACTGATAAGAAGAT |
|
|
|
MA0078.1_Sox17/Jaspar
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CATTGACAAGCA
CTCATTGTC----- |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CATTGACAAGCA
NTGATTGACAGN-- |
|
|
|
