Information for motif27


Reverse Opposite:

p-value:1e-12
log p-value:-2.949e+01
Information Content per bp:1.530
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif9.39%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets428.7 +/- 388.9bp
Average Position of motif in Background583.2 +/- 243.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GTATCCTGTGGA-
-------GTGGAT

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTATCCTGTGGA
ACTTCCTGTT--

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTATCCTGTGGA
ATTTCCTGTN--

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTATCCTGTGGA
----GCTGTG--

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTATCCTGTGGA
ATTTCCTGTN--

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTATCCTGTGGA--
---GTCTGTGGTTT

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTATCCTGTGGA-----
------TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTATCCTGTGGA----
----NNTGTGGATTSS

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTATCCTGTGGA
ACATCCTGNT--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTATCCTGTGGA---
---NNHTGTGGTTWN