Information for motif28


Reverse Opposite:

p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.705
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif24.88%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif8.27%
Average Position of motif in Targets496.1 +/- 557.4bp
Average Position of motif in Background457.7 +/- 462.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CATYTCCT---
-ATTTCCTGTN

MA0156.1_FEV/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CATYTCCT-
-ATTTCCTG

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CATYTCCT-
TACTTCCTT

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATYTCCT-
AAGATATCCTT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CATYTCCT---
-ATTTCCTGTN

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CATYTCCT--
CACTTCCTCT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CATYTCCT--
CACTTCCTGT

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CATYTCCT--
CACTTCCTGT

MA0474.1_Erg/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CATYTCCT--
CCACTTCCTGT

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATYTCCT
GCCATCTGTT