Information for motif29


Reverse Opposite:

p-value:1e-12
log p-value:-2.820e+01
Information Content per bp:1.951
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif12.21%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets514.1 +/- 429.4bp
Average Position of motif in Background321.6 +/- 183.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAAG---
GAGCACAGCAGGACA

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAAG-
AACAGGAAGT

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAAG
CACAGN---

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAAG---
CACAGCAGGGGG

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAAG---
CCACACAGCAGGAGA

MA0474.1_Erg/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACAGCAAG---
ACAGGAAGTGG

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACAGCAAG--
ACAGGAAGTG

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAAG---
CCACACAGCAGGAGA

MA0098.2_Ets1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCAAG----
NNNACAGGAAGTGGN

MA0475.1_FLI1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACAGCAAG---
ACAGGAAGTGG