Information for motif31


Reverse Opposite:

p-value:1e-11
log p-value:-2.643e+01
Information Content per bp:1.443
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif9.86%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets474.5 +/- 380.5bp
Average Position of motif in Background526.1 +/- 306.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CAAGCCTGTGAC
----GCTGTG--

MA0164.1_Nr2e3/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGCCTGTGAC
-AAGCTTG----

MA0526.1_USF2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAAGCCTGTGAC-
--GTCATGTGACC

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAAGCCTGTGAC--
----CCTTTGATGT

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAAGCCTGTGAC--
----CCTTTGAWGT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCCTGTGAC
CNAGGCCT-----

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAAGCCTGTGAC--
--TNCCTTTGATGT

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAAGCCTGTGAC---
---GSCTGTCACTCA

MA0464.1_Bhlhe40/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAAGCCTGTGAC
-NTGCACGTGAG

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAGCCTGTGAC-----
AATCCCTTTGATCTATC