Information for motif33


Reverse Opposite:

p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets699.4 +/- 593.0bp
Average Position of motif in Background467.1 +/- 203.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGGTCTTT-
ANTNTTACATGTATNTA

PH0087.1_Irx6/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGGTCTTT-
ANTTNTACATGTANTTN

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGGTCTTT
GGATTGACAGGTCNTT

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGGTCTTT-
ANTNNTACATGTANNTN

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTACAGGTCTTT--
AATATACATGTAATATA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTACAGGTCTTT
-NNCAGGTGNN-

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTACAGGTCTTT----
----AGGTCTCTAACC

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTACAGGTCTTT--
AAAATACATGTAATACT

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGGTCTTT
NTATTGACAGGTNNTN

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGGTCTTT
GTATTGACAGGTNNTT