Information for motif35


Reverse Opposite:

p-value:1e-10
log p-value:-2.427e+01
Information Content per bp:1.952
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.33%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets464.7 +/- 521.2bp
Average Position of motif in Background193.4 +/- 162.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ACATTATT
-AATTATT

MA0087.1_Sox5/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACATTATT-
--ATTGTTA

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACATTATT
--ATTGTT

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACATTATT-----
TATCATAATTAAGGA

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACATTATT----
ANNTCCATTGTTCNNN

MA0132.1_Pdx1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACATTATT
-AATTAG-

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACATTATT-------
NAAANTTATTGAANCAN

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACATTATT------
TTCAATTGTTCTAAAA

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACATTATT--
NNTNNCAATATTAG

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ACATTATT---
GCAACCTCATTATNNNN