Information for motif37


Reverse Opposite:

p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.636
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif13.15%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif3.37%
Average Position of motif in Targets208.8 +/- 178.5bp
Average Position of motif in Background376.4 +/- 253.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TAGATATGTGCC-
GACAGAGATATCAGTGT

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGATATGTGCC---
NNNNTTGTGTGCTTNN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TAGATATGTGCC---
-----CTGTTCCTGG

MA0037.2_GATA3/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAGATATGTGCC
-AGATAAGA---

MA0035.3_Gata1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TAGATATGTGCC
ANAGATAAGAA--

MA0058.2_MAX/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TAGATATGTGCC-
---CCATGTGCTT

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAGATATGTGCC-
GGAGAAAGGTGCGA

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TAGATATGTGCC--
ANNNGGATATATCCNNN

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TAGATATGTGCC----
TTTTTAGAGATAAGAAATAAAG

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TAGATATGTGCC
AAGGATATNTN--