Information for motif38


Reverse Opposite:

p-value:1e-9
log p-value:-2.138e+01
Information Content per bp:1.681
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif11.27%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets484.0 +/- 361.7bp
Average Position of motif in Background550.5 +/- 602.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGAGTAGGAG
TGCGTGGGYG

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGAGTAGGAG---
TGCGGAGTGGGACTGG

MA0472.1_EGR2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTAGGAG----
GTGCGTGGGCGGGNG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAGTAGGAG--
NGCGTGGGCGGR

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAGTAGGAG
TTAAGTGGA--

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAGTAGGAG------
CTACTAGGATGTNNTN

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGAGTAGGAG
GGTAAGTA----

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGAGTAGGAG--
NNTGTAGGTAGCANNT

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAGTAGGAG--
TGAGTGACAGSC

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGAGTAGGAG-
CACAGCAGGGGG