Information for motif4


Reverse Opposite:

p-value:1e-20
log p-value:-4.679e+01
Information Content per bp:1.856
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif8.92%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets457.8 +/- 434.4bp
Average Position of motif in Background135.3 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTCCATTC---
NNGCACCTTTCTCC

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTCCATTC-----
NNCATTCATTCATNNN

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCATTC-------
GACCACATTCATACAAT

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCCATTC--------
--ACATTCATGACACG

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCCATTC--
GTTTCACTTCCG

MA0090.1_TEAD1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCCATTC-----
-CACATTCCTCCG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCCATTC----
--RCATTCCWGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCCATTC----
--GCATTCCAGN

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCCATTC-----
GGACTGAATTCATGCC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCCATTC
ATTTTCCATT-